Last updated on 2025-12-15 09:50:26 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.26 | 255.73 | 265.99 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 175.00 | 185.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 250.00 | 261.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 238.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/124s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.604, system: 0.052, elapsed: 2.133 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.445, system: 0.114, elapsed: 12.190 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.015, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.882, system: 0.221, elapsed: 4.895 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.223 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.838, system: 0.431, elapsed: 20.415 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.037, elapsed: 1.723 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.406, system: 0.176, elapsed: 11.041 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.015, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.134, system: 0.281, elapsed: 5.998 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.009, elapsed: 0.257 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.024, system: 0.545, elapsed: 20.031 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.799, system: 0.094, elapsed: 2.285 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.694, system: 0.283, elapsed: 14.979 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.014, elapsed: 0.603 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.077, system: 0.233, elapsed: 9.883 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.015, elapsed: 0.469 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.220, system: 0.264, elapsed: 2.115 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.824, system: 0.946, elapsed: 31.764 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.652, system: 0.058, elapsed: 4.032 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.754, system: 0.233, elapsed: 16.134 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.017, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.202, system: 0.292, elapsed: 5.998 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.011, elapsed: 0.244 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.206, system: 0.880, elapsed: 16.103 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.878, system: 1.525, elapsed: 44.087 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/148s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.618, system: 0.043, elapsed: 2.859 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.542, system: 0.063, elapsed: 15.920 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.016, elapsed: 0.417 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.813, system: 0.203, elapsed: 7.443 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.004, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.929, system: 0.360, elapsed: 28.013 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.635, system: 0.033, elapsed: 2.476 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.569, system: 0.089, elapsed: 17.676 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.850, system: 0.178, elapsed: 7.870 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.342 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.989, system: 0.348, elapsed: 29.778 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.627, system: 0.039, elapsed: 3.523 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.582, system: 0.090, elapsed: 18.104 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.835, system: 0.194, elapsed: 5.611 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.008, elapsed: 0.255 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.150, system: 0.281, elapsed: 1.078 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.227, system: 0.654, elapsed: 30.081 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.608, system: 0.033, elapsed: 2.871 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.551, system: 0.077, elapsed: 16.430 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.368 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.823, system: 0.184, elapsed: 7.345 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.285 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.685, system: 0.485, elapsed: 21.546 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.686, system: 0.818, elapsed: 50.070 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64