Last updated on 2025-07-31 09:49:59 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 252.26 | 264.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.43 | 234.54 | 244.97 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 157.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 171.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 281.00 | 305.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.497, system: 0.041, elapsed: 2.346 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.925, system: 0.093, elapsed: 13.088 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.014, elapsed: 0.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.664, system: 0.194, elapsed: 5.222 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.195 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.974, system: 0.367, elapsed: 21.871 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.504, system: 0.047, elapsed: 2.101 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.979, system: 0.105, elapsed: 11.817 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.244 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.588, system: 0.155, elapsed: 4.762 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.206 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.934, system: 0.347, elapsed: 19.827 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.500, system: 0.032, elapsed: 1.884 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.942, system: 0.071, elapsed: 12.768 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.695, system: 0.171, elapsed: 5.496 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.198 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.125, system: 0.227, elapsed: 0.933 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.234, system: 0.537, elapsed: 22.452 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.459, system: 0.046, elapsed: 2.131 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.032, system: 0.194, elapsed: 12.427 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.013, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.748, system: 0.223, elapsed: 5.864 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.006, elapsed: 0.242 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.134, system: 0.453, elapsed: 14.034 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.361, system: 0.981, elapsed: 35.959 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.040, elapsed: 2.569 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.015, system: 0.077, elapsed: 14.314 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.016, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.620, system: 0.198, elapsed: 5.904 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.233 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.028, system: 0.353, elapsed: 24.193 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.038, elapsed: 2.313 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.936, system: 0.071, elapsed: 16.101 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.015, elapsed: 0.442 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.684, system: 0.169, elapsed: 8.872 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.361 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.988, system: 0.319, elapsed: 29.097 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.033, elapsed: 2.932 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.032, system: 0.056, elapsed: 14.141 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.239 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.472, system: 0.178, elapsed: 4.908 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.006, elapsed: 0.212 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.069, system: 0.227, elapsed: 1.101 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.025, system: 0.547, elapsed: 24.714 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.048, elapsed: 2.184 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.164, system: 0.217, elapsed: 13.041 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.017, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.466, system: 0.185, elapsed: 3.963 seconds]
Computing values for grid cells...
... done. [user: 0.152, system: 0.002, elapsed: 0.155 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.863, system: 0.421, elapsed: 12.474 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.990, system: 0.930, elapsed: 32.992 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64