Last updated on 2025-07-02 09:51:08 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 12.00 | 206.47 | 218.47 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 10.64 | 168.39 | 179.03 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.3 | 264.24 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.3 | 333.16 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 20.00 | 165.00 | 185.00 | OK | |
| r-patched-linux-x86_64 | OK | |||||
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.3 | 142.00 | ERROR | |||
| r-release-windows-x86_64 | 1.0.5 | 22.00 | 88.00 | 110.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.3 | 137.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.3 | 24.00 | 203.00 | 227.00 | OK |
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [62s/93s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.054, elapsed: 1.891 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.931, system: 0.116, elapsed: 10.822 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.290 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.747, system: 0.193, elapsed: 5.305 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.098, system: 0.405, elapsed: 19.160 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.370, system: 0.028, elapsed: 1.412 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.012, system: 0.081, elapsed: 14.071 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.352 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.761, system: 0.168, elapsed: 6.964 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.054, system: 0.310, elapsed: 23.918 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.032, elapsed: 2.945 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.964, system: 0.064, elapsed: 15.426 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.726, system: 0.175, elapsed: 6.539 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.315 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.093, system: 0.473, elapsed: 16.680 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.322, system: 0.781, elapsed: 43.376 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [61s/83s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.579, system: 0.054, elapsed: 1.759 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.398, system: 0.076, elapsed: 8.903 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.168, system: 0.012, elapsed: 0.182 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.372, system: 0.172, elapsed: 3.753 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.199 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.197, system: 0.337, elapsed: 15.390 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.045, elapsed: 1.930 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.858, system: 0.078, elapsed: 10.285 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.012, elapsed: 0.194 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.572, system: 0.165, elapsed: 5.789 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.355 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.867, system: 0.323, elapsed: 19.255 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.627, system: 0.035, elapsed: 3.441 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.035, system: 0.069, elapsed: 15.102 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.504, system: 0.158, elapsed: 5.922 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.299 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.002, system: 0.476, elapsed: 15.638 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.150, system: 0.774, elapsed: 41.816 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64